Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CD28P10747 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CD28P10747 MIR1227-201ENST00000408484 88 ntBASIC10.89□□□□□ -0.67
CD28P10747 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC10.89□□□□□ -0.67
CD28P10747 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC10.89□□□□□ -0.67
CD28P10747 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC10.89□□□□□ -0.67
CD28P10747 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 STK24P1-201ENST00000455035 1291 ntBASIC10.89□□□□□ -0.67
CD28P10747 EEF1GP8-201ENST00000506566 1154 ntBASIC10.89□□□□□ -0.67
CD28P10747 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CD28P10747 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 NT5C-204ENST00000578337 582 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 TRMT112P3-201ENST00000580149 358 ntBASIC10.89□□□□□ -0.67
CD28P10747 AL009176.1-201ENST00000607876 650 ntBASIC10.89□□□□□ -0.67
CD28P10747 AL031673.1-201ENST00000611460 466 ntBASIC10.89□□□□□ -0.67
CD28P10747 MIR6756-201ENST00000616240 63 ntBASIC10.89□□□□□ -0.67
CD28P10747 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC10.89□□□□□ -0.67
CD28P10747 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 BX640514.1-201ENST00000583223 1918 ntBASIC10.89□□□□□ -0.67
CD28P10747 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CD28P10747 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 FAM90A21P-201ENST00000510875 1396 ntBASIC10.89□□□□□ -0.67
CD28P10747 FAM90A15P-201ENST00000514465 1395 ntBASIC10.89□□□□□ -0.67
CD28P10747 FAM90A6P-201ENST00000515148 1394 ntBASIC10.89□□□□□ -0.67
CD28P10747 FAM90A16P-201ENST00000526662 1395 ntBASIC10.89□□□□□ -0.67
CD28P10747 FAM90A9P-201ENST00000527940 1395 ntBASIC10.89□□□□□ -0.67
CD28P10747 FAM90A5P-201ENST00000528738 1395 ntBASIC10.89□□□□□ -0.67
CD28P10747 FAM90A14P-201ENST00000530386 1395 ntBASIC10.89□□□□□ -0.67
CD28P10747 FAM90A13P-201ENST00000534703 1395 ntBASIC10.89□□□□□ -0.67
CD28P10747 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 AC068760.1-201ENST00000493579 1953 ntBASIC10.88□□□□□ -0.67
CD28P10747 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 LINC02486-201ENST00000604157 3000 ntBASIC10.88□□□□□ -0.67
CD28P10747 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 PSMD4P1-201ENST00000433951 1109 ntBASIC10.88□□□□□ -0.67
CD28P10747 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC10.88□□□□□ -0.67
CD28P10747 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 AC008026.2-201ENST00000495438 348 ntBASIC10.88□□□□□ -0.67
CD28P10747 AC093826.1-201ENST00000508655 993 ntBASIC10.88□□□□□ -0.67
CD28P10747 NSD1-211ENST00000511258 809 ntTSL 3 BASIC10.88□□□□□ -0.67
CD28P10747 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC10.88□□□□□ -0.67
CD28P10747 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms