Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 AL157407.1-201ENST00000435784 904 ntBASIC15.62■□□□□ 0.09
TPM3P06753 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 TSPY16P-201ENST00000449843 468 ntBASIC15.62■□□□□ 0.09
TPM3P06753 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TPM3P06753 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.62■□□□□ 0.09
TPM3P06753 RFPL4AP1-201ENST00000530883 850 ntBASIC15.62■□□□□ 0.09
TPM3P06753 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 MIR6720-201ENST00000611664 98 ntBASIC15.62■□□□□ 0.09
TPM3P06753 AC023511.2-201ENST00000618803 211 ntBASIC15.62■□□□□ 0.09
TPM3P06753 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
TPM3P06753 KRT8P4-201ENST00000509735 1454 ntBASIC15.62■□□□□ 0.09
TPM3P06753 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.62■□□□□ 0.09
TPM3P06753 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TPM3P06753 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 AL645937.6-201ENST00000641122 3727 ntBASIC15.61■□□□□ 0.09
TPM3P06753 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC15.61■□□□□ 0.09
TPM3P06753 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC15.61■□□□□ 0.09
TPM3P06753 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 PIN1P1-201ENST00000412108 996 ntBASIC15.61■□□□□ 0.09
TPM3P06753 AL645933.1-201ENST00000440087 609 ntBASIC15.61■□□□□ 0.09
TPM3P06753 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.61■□□□□ 0.09
TPM3P06753 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 AC022217.1-201ENST00000521069 738 ntBASIC15.61■□□□□ 0.09
TPM3P06753 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TPM3P06753 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TPM3P06753 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 TRIM80P-201ENST00000455685 2848 ntBASIC15.61■□□□□ 0.09
TPM3P06753 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TPM3P06753 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TPM3P06753 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TPM3P06753 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 LINC00563-201ENST00000566370 1400 ntBASIC15.6■□□□□ 0.09
TPM3P06753 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms