Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 AC026271.1-201ENST00000447794 1348 ntBASIC14.5□□□□□ -0.09
RB1P06400 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
RB1P06400 TUBB2BP1-201ENST00000404155 871 ntBASIC14.5□□□□□ -0.09
RB1P06400 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC14.5□□□□□ -0.09
RB1P06400 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.5□□□□□ -0.09
RB1P06400 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC14.5□□□□□ -0.09
RB1P06400 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.5□□□□□ -0.09
RB1P06400 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC14.5□□□□□ -0.09
RB1P06400 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.5□□□□□ -0.09
RB1P06400 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 AC008622.3-201ENST00000621170 600 ntBASIC14.5□□□□□ -0.09
RB1P06400 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RB1P06400 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 SNORA50D-201ENST00000408059 134 ntBASIC14.49□□□□□ -0.09
RB1P06400 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.49□□□□□ -0.09
RB1P06400 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.49□□□□□ -0.09
RB1P06400 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 RNA5SP288-201ENST00000516075 93 ntBASIC14.49□□□□□ -0.09
RB1P06400 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.49□□□□□ -0.09
RB1P06400 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 BAP1-211ENST00000615113 489 ntBASIC14.49□□□□□ -0.09
RB1P06400 SNORA50D-202ENST00000627561 132 ntBASIC14.49□□□□□ -0.09
RB1P06400 COG6-212ENST00000630730 186 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 AL513497.1-201ENST00000624273 2083 ntBASIC14.49□□□□□ -0.09
RB1P06400 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RB1P06400 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RB1P06400 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.49□□□□□ -0.09
RB1P06400 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.48□□□□□ -0.09
RB1P06400 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms