Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KRT6AP02538 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 BX679664.3-201ENST00000414070 555 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 RPS9P1-201ENST00000419943 583 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.53□□□□□ -0.24
KRT6AP02538 AC113935.1-201ENST00000471722 555 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.53□□□□□ -0.24
KRT6AP02538 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 AL161773.1-201ENST00000624845 863 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 REXO1L1P-201ENST00000379010 6598 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 AP001972.5-201ENST00000624624 2338 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 AC004554.1-201ENST00000422830 1468 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 KRT8P21-201ENST00000430398 1491 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 AC024075.2-201ENST00000598112 1473 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 LINC00638-201ENST00000555578 2518 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 AC019294.4-201ENST00000561777 2905 ntBASIC13.53□□□□□ -0.24
KRT6AP02538 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.53□□□□□ -0.24
KRT6AP02538 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.52□□□□□ -0.24
KRT6AP02538 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.52□□□□□ -0.24
KRT6AP02538 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 AC011700.1-201ENST00000610409 2627 ntBASIC13.52□□□□□ -0.24
KRT6AP02538 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
KRT6AP02538 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KRT6AP02538 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 RNA5SP359-201ENST00000364838 113 ntBASIC13.52□□□□□ -0.25
KRT6AP02538 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.52□□□□□ -0.25
KRT6AP02538 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.52□□□□□ -0.25
KRT6AP02538 ATP5G2P4-201ENST00000442175 420 ntBASIC13.52□□□□□ -0.25
KRT6AP02538 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.52□□□□□ -0.25
KRT6AP02538 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.52□□□□□ -0.25
KRT6AP02538 RN7SL455P-201ENST00000580629 282 ntBASIC13.52□□□□□ -0.25
KRT6AP02538 AC091271.1-201ENST00000611877 1162 ntBASIC13.52□□□□□ -0.25
KRT6AP02538 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.52□□□□□ -0.25
KRT6AP02538 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
KRT6AP02538 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KRT6AP02538 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
KRT6AP02538 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KRT6AP02538 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.52□□□□□ -0.25
KRT6AP02538 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
KRT6AP02538 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.52□□□□□ -0.25
KRT6AP02538 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.52□□□□□ -0.25
KRT6AP02538 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KRT6AP02538 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KRT6AP02538 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
KRT6AP02538 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KRT6AP02538 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms