Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 SOD2-202ENST00000367054 815 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 NME4-203ENST00000397722 1232 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 AC092573.1-201ENST00000433054 884 ntBASIC10.74□□□□□ -0.69
TRBV12-3P01733 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 RNA5SP423-201ENST00000517127 109 ntBASIC10.74□□□□□ -0.69
TRBV12-3P01733 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 AC019109.1-201ENST00000401725 1874 ntBASIC10.74□□□□□ -0.69
TRBV12-3P01733 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC135782.3-201ENST00000562782 2105 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ODCP-201ENST00000459650 1639 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AL731571.1-201ENST00000617058 5428 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 EEF1DP2-201ENST00000433698 843 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 GRPEL2P1-201ENST00000453145 339 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 RN7SL81P-201ENST00000493781 261 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 OR5BD1P-201ENST00000532527 817 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 CFL1-214ENST00000534769 758 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC079328.1-201ENST00000560358 952 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 HERC2P11-201ENST00000562845 725 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC100756.2-201ENST00000569537 736 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC007881.3-201ENST00000608897 607 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC103691.2-201ENST00000618824 433 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms