Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 GDA-203ENST00000376986 1771 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 MIR339-201ENST00000362153 94 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 TUBB2BP1-201ENST00000404155 871 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 TEDDM2P-201ENST00000414169 786 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AL954722.1-201ENST00000431238 259 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 HINT1-204ENST00000506908 681 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 IFNL3P1-201ENST00000595082 501 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC021321.1-201ENST00000607397 1113 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AP006248.1-201ENST00000610471 67 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 ZDHHC8P1-202ENST00000418264 1403 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 STK3-218ENST00000617590 2485 ntTSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 FTO-214ENST00000636218 2227 ntTSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC073862.3-201ENST00000624597 1648 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC067942.1-202ENST00000471756 1057 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 TMA16-204ENST00000508268 608 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 FRG2EP-201ENST00000634243 835 ntBASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHANK2Q9UPX8 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 HNRNPA1P3-201ENST00000440968 551 ntBASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 AC007679.1-201ENST00000458609 502 ntBASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 MIR4539-201ENST00000579784 60 ntBASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 MIR4763-201ENST00000581461 92 ntBASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
SHANK2Q9UPX8 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 AHCYP7-201ENST00000560847 1308 ntBASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 GOLGA8DP-202ENST00000341390 2184 ntBASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 AADAC-202ENST00000488869 719 ntTSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 TPST2P1-201ENST00000564073 1102 ntBASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms