Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AC008764.8-201ENST00000623966 2717 ntBASIC12.43□□□□□ -0.42
SSR3Q9UNL2 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 TUBB2BP1-201ENST00000404155 871 ntBASIC12.43□□□□□ -0.42
SSR3Q9UNL2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 CLUHP6-201ENST00000580789 941 ntBASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AC010327.4-202ENST00000591484 748 ntBASIC12.43□□□□□ -0.42
SSR3Q9UNL2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AC093726.1-201ENST00000608064 963 ntBASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AC004790.1-201ENST00000612686 536 ntBASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AC145423.3-201ENST00000615987 467 ntBASIC12.43□□□□□ -0.42
SSR3Q9UNL2 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSR3Q9UNL2 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 FLJ30679-201ENST00000624773 1980 ntBASIC12.42□□□□□ -0.42
SSR3Q9UNL2 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 TPM3P8-201ENST00000330554 643 ntBASIC12.42□□□□□ -0.42
SSR3Q9UNL2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 CD8B2-202ENST00000417670 633 ntBASIC12.42□□□□□ -0.42
SSR3Q9UNL2 TSEN15P1-201ENST00000423257 515 ntBASIC12.42□□□□□ -0.42
SSR3Q9UNL2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSR3Q9UNL2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms