Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 BEND3P3-201ENST00000611030 2440 ntBASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 DUX4L50-201ENST00000455245 715 ntBASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 AKR7A2P1-201ENST00000460134 915 ntBASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 MEG3_2.1-201ENST00000611456 105 ntBASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 AC079336.7-201ENST00000623428 1078 ntBASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
UPF3BQ9BZI7 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 AC026740.1-201ENST00000607068 791 ntBASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 AL021707.6-201ENST00000609212 491 ntBASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPF3BQ9BZI7 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AC073862.5-201ENST00000624129 2027 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 PCDHB19P-202ENST00000625133 2914 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms