Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 MIR326-201ENST00000362220 95 ntBASIC11.32□□□□□ -0.6
RAB40CQ96S21 AC098614.1-201ENST00000368528 745 ntBASIC11.32□□□□□ -0.6
RAB40CQ96S21 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 TUBB2BP1-201ENST00000404155 871 ntBASIC11.32□□□□□ -0.6
RAB40CQ96S21 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 AL157407.1-201ENST00000435784 904 ntBASIC11.32□□□□□ -0.6
RAB40CQ96S21 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 AL356740.1-201ENST00000602192 1297 ntBASIC11.32□□□□□ -0.6
RAB40CQ96S21 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 LINC00563-201ENST00000566370 1400 ntBASIC11.32□□□□□ -0.6
RAB40CQ96S21 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 IL9RP3-201ENST00000442856 1674 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 AC112492.5-201ENST00000421897 457 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 ACTG1P3-201ENST00000431775 1114 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 COX5BP1-201ENST00000507622 393 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 AC025279.2-201ENST00000569730 653 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 AC132192.2-201ENST00000596206 1147 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 MIR6720-201ENST00000611664 98 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 ZACNP1-201ENST00000612259 710 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 AL161773.1-201ENST00000624845 863 ntBASIC11.31□□□□□ -0.6
RAB40CQ96S21 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms