Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
VCLP18206 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VCLP18206 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.07□□□□□ -0.16
VCLP18206 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VCLP18206 AC015909.3-201ENST00000572855 1794 ntBASIC14.06□□□□□ -0.16
VCLP18206 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VCLP18206 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VCLP18206 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 AC073150.1-201ENST00000450406 1084 ntBASIC14.06□□□□□ -0.16
VCLP18206 KRT8P1-201ENST00000557533 1207 ntBASIC14.06□□□□□ -0.16
VCLP18206 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.06□□□□□ -0.16
VCLP18206 AL021578.1-201ENST00000613646 709 ntBASIC14.06□□□□□ -0.16
VCLP18206 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VCLP18206 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 AL590824.1-201ENST00000403828 1349 ntBASIC14.06□□□□□ -0.16
VCLP18206 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VCLP18206 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.06□□□□□ -0.16
VCLP18206 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 FAM90A2P-201ENST00000511144 1395 ntBASIC14.06□□□□□ -0.16
VCLP18206 FAM90A25P-201ENST00000528404 1395 ntBASIC14.06□□□□□ -0.16
VCLP18206 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
VCLP18206 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.06□□□□□ -0.16
VCLP18206 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.06□□□□□ -0.16
VCLP18206 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.06□□□□□ -0.16
VCLP18206 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.06□□□□□ -0.16
VCLP18206 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCLP18206 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.05□□□□□ -0.16
VCLP18206 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VCLP18206 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VCLP18206 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 VENTXP1-201ENST00000569334 2716 ntBASIC14.05□□□□□ -0.16
VCLP18206 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 PDIA3P2-201ENST00000428073 158 ntBASIC14.05□□□□□ -0.16
VCLP18206 AC026320.2-201ENST00000434379 478 ntBASIC14.05□□□□□ -0.16
VCLP18206 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.05□□□□□ -0.16
VCLP18206 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 RTN3P1-201ENST00000536295 711 ntBASIC14.05□□□□□ -0.16
VCLP18206 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
VCLP18206 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.05□□□□□ -0.16
VCLP18206 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 MIR4754-201ENST00000582477 89 ntBASIC14.05□□□□□ -0.16
VCLP18206 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.05□□□□□ -0.16
VCLP18206 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VCLP18206 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VCLP18206 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms