Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 KRT8P31-201ENST00000504812 1408 ntBASIC12.48□□□□□ -0.41
HLA-DOBP13765 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 KRT18P9-201ENST00000604826 1300 ntBASIC12.48□□□□□ -0.41
HLA-DOBP13765 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 OR2K2-202ENST00000374428 1038 ntBASIC12.48□□□□□ -0.41
HLA-DOBP13765 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CALR4P-201ENST00000431943 946 ntBASIC12.48□□□□□ -0.41
HLA-DOBP13765 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 AC020922.3-201ENST00000595064 547 ntBASIC12.48□□□□□ -0.41
HLA-DOBP13765 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 AF254983.2-201ENST00000612331 135 ntBASIC12.48□□□□□ -0.41
HLA-DOBP13765 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 TBC1D27-202ENST00000424239 1573 ntBASIC12.47□□□□□ -0.41
HLA-DOBP13765 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC114271.1-201ENST00000612689 2813 ntBASIC12.47□□□□□ -0.41
HLA-DOBP13765 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC006335.1-201ENST00000445200 547 ntBASIC12.47□□□□□ -0.41
HLA-DOBP13765 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC095040.1-201ENST00000513286 675 ntBASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC114947.1-202ENST00000514136 344 ntBASIC12.47□□□□□ -0.41
HLA-DOBP13765 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms