Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM3P06753 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.64■□□□□ 0.09
TPM3P06753 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TPM3P06753 AC005229.1-201ENST00000392885 409 ntBASIC15.64■□□□□ 0.09
TPM3P06753 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.64■□□□□ 0.09
TPM3P06753 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.64■□□□□ 0.09
TPM3P06753 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.64■□□□□ 0.09
TPM3P06753 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TPM3P06753 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.64■□□□□ 0.09
TPM3P06753 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.64■□□□□ 0.09
TPM3P06753 WASH4P-201ENST00000564273 1246 ntBASIC15.64■□□□□ 0.09
TPM3P06753 AC124068.2-201ENST00000569473 1109 ntBASIC15.64■□□□□ 0.09
TPM3P06753 GNRHR2-203ENST00000581100 1187 ntBASIC15.64■□□□□ 0.09
TPM3P06753 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.64■□□□□ 0.09
TPM3P06753 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 AC073413.1-201ENST00000603927 732 ntBASIC15.64■□□□□ 0.09
TPM3P06753 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.64■□□□□ 0.09
TPM3P06753 AC006453.4-201ENST00000636949 1252 ntBASIC15.64■□□□□ 0.09
TPM3P06753 AL031432.4-201ENST00000641729 2190 ntBASIC15.64■□□□□ 0.09
TPM3P06753 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM3P06753 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM3P06753 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM3P06753 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM3P06753 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 SHMT1P1-201ENST00000419974 1312 ntBASIC15.64■□□□□ 0.09
TPM3P06753 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TPM3P06753 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM3P06753 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM3P06753 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TPM3P06753 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.63■□□□□ 0.09
TPM3P06753 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 AP001889.1-201ENST00000525414 633 ntBASIC15.63■□□□□ 0.09
TPM3P06753 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 AC132192.2-201ENST00000596206 1147 ntBASIC15.63■□□□□ 0.09
TPM3P06753 AJ011932.1-201ENST00000621707 465 ntBASIC15.63■□□□□ 0.09
TPM3P06753 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.63■□□□□ 0.09
TPM3P06753 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.63■□□□□ 0.09
TPM3P06753 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC15.63■□□□□ 0.09
TPM3P06753 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TPM3P06753 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TPM3P06753 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TPM3P06753 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TPM3P06753 FLJ30679-201ENST00000624773 1980 ntBASIC15.62■□□□□ 0.09
TPM3P06753 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TPM3P06753 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TPM3P06753 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms