Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 LINC02486-201ENST00000604157 3000 ntBASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 LINC00115-201ENST00000473798 1317 ntBASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AL022323.5-201ENST00000624101 2059 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AGER-203ENST00000375065 665 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC136604.1-202ENST00000425471 771 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 EIF4HP1-201ENST00000453115 687 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 RN7SL277P-201ENST00000481521 288 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 RN7SL530P-201ENST00000485097 298 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AP001258.2-201ENST00000529891 490 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC020914.3-201ENST00000594712 304 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC243960.2-201ENST00000600996 747 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC026740.1-201ENST00000607068 791 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 AL805961.1-203ENST00000641078 1258 ntBASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HLA-DRB4X5D2U9 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 RPL13AP3-202ENST00000494676 1473 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC061965.1-201ENST00000560524 1465 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms