Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRFN1Q9P244 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRFN1Q9P244 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRFN1Q9P244 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRFN1Q9P244 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRFN1Q9P244 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRFN1Q9P244 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 AC152010.1-201ENST00000415779 2006 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 RCC2P1-201ENST00000452257 1476 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 AC061965.1-201ENST00000560524 1465 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 OR7E115P-201ENST00000382617 1024 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 STK24P1-201ENST00000455035 1291 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 AC093300.1-201ENST00000510368 1201 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 AC100858.1-201ENST00000514059 1228 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 AL132994.1-201ENST00000554098 400 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 MIR4472-1-201ENST00000584349 80 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 AC012073.1-201ENST00000606114 1108 ntBASIC12.79□□□□□ -0.36
LRFN1Q9P244 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRFN1Q9P244 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LRFN1Q9P244 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AC025183.3-201ENST00000623526 1482 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AC097065.1-201ENST00000425737 517 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 KRT18P62-201ENST00000446618 1287 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 ALG1L6P-201ENST00000515248 758 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 MIR5196-201ENST00000578146 115 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 AL049840.2-201ENST00000602722 535 ntBASIC12.78□□□□□ -0.36
LRFN1Q9P244 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LRFN1Q9P244 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRFN1Q9P244 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms