Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 PEBP1P1-201ENST00000554856 510 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 TCAF1P1-201ENST00000414990 2232 ntBASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 PPP1R2P10-201ENST00000393023 595 ntBASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 AC099552.4-201ENST00000624248 949 ntBASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 AC005154.3-201ENST00000419639 1393 ntBASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHANK3Q9BYB0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 POLR3DP1-201ENST00000398689 1176 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AL391903.1-201ENST00000407513 365 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 HNRNPA1P68-201ENST00000425806 979 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AKR1C6P-201ENST00000432950 983 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 RPL13AP5-201ENST00000439189 612 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 RPS15P5-201ENST00000449885 432 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 ST3GAL1P1-201ENST00000513810 1014 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC091691.1-201ENST00000583587 1018 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC072061.1-201ENST00000569710 2234 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 IMPDH1P5-201ENST00000439688 1540 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AL136298.3-201ENST00000556746 445 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AL139317.2-201ENST00000556998 158 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC090616.6-202ENST00000583601 1088 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 RPSAP67-201ENST00000584105 862 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC239600.1-201ENST00000603201 462 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC108673.2-201ENST00000608909 565 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC091736.1-201ENST00000609370 305 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AL158032.2-201ENST00000616818 195 ntBASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC17.16■□□□□ 0.34
SHANK3Q9BYB0 AC073862.3-201ENST00000624597 1648 ntBASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHANK3Q9BYB0 FAM90A12P-201ENST00000519497 2375 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms