Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AC100850.1-201ENST00000506768 649 ntBASIC12.47□□□□□ -0.41
LRRC28Q86X40 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AC104982.3-201ENST00000581995 514 ntBASIC12.47□□□□□ -0.41
LRRC28Q86X40 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AC008825.2-201ENST00000603374 718 ntBASIC12.47□□□□□ -0.41
LRRC28Q86X40 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 AC110048.1-201ENST00000604293 2157 ntBASIC12.47□□□□□ -0.41
LRRC28Q86X40 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.47□□□□□ -0.41
LRRC28Q86X40 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LRRC28Q86X40 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 MIR663B-201ENST00000408361 115 ntBASIC12.46□□□□□ -0.41
LRRC28Q86X40 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 PUDPP3-201ENST00000445368 636 ntBASIC12.46□□□□□ -0.41
LRRC28Q86X40 HSPB1P2-201ENST00000448722 546 ntBASIC12.46□□□□□ -0.41
LRRC28Q86X40 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 AL358472.3-201ENST00000608147 415 ntBASIC12.46□□□□□ -0.41
LRRC28Q86X40 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 AL136301.1-201ENST00000615830 422 ntBASIC12.46□□□□□ -0.41
LRRC28Q86X40 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
LRRC28Q86X40 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LRRC28Q86X40 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms