Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 AC074138.1-201ENST00000611182 1303 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 AC008040.5-201ENST00000599781 1781 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 AL355102.3-201ENST00000554299 1678 ntBASIC12.55□□□□□ -0.4
SUMO3P55854 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SUMO3P55854 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 AP000356.3-201ENST00000382243 753 ntBASIC12.55□□□□□ -0.4
SUMO3P55854 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.55□□□□□ -0.4
SUMO3P55854 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.55□□□□□ -0.4
SUMO3P55854 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.55□□□□□ -0.4
SUMO3P55854 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.55□□□□□ -0.4
SUMO3P55854 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.55□□□□□ -0.4
SUMO3P55854 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.55□□□□□ -0.4
SUMO3P55854 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.55□□□□□ -0.4
SUMO3P55854 AC138894.2-201ENST00000602838 371 ntBASIC12.55□□□□□ -0.4
SUMO3P55854 AL009176.1-201ENST00000607876 650 ntBASIC12.55□□□□□ -0.4
SUMO3P55854 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 AL353726.2-201ENST00000623259 884 ntBASIC12.55□□□□□ -0.4
SUMO3P55854 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.55□□□□□ -0.4
SUMO3P55854 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.55□□□□□ -0.4
SUMO3P55854 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 AGAP12P-201ENST00000585227 2359 ntBASIC12.55□□□□□ -0.4
SUMO3P55854 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SUMO3P55854 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SUMO3P55854 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 AC073862.5-201ENST00000624129 2027 ntBASIC12.54□□□□□ -0.4
SUMO3P55854 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms