Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CD40P25942 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CD40P25942 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 GGTLC4P-201ENST00000402176 664 ntBASIC11.97□□□□□ -0.49
CD40P25942 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC11.97□□□□□ -0.49
CD40P25942 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC11.97□□□□□ -0.49
CD40P25942 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC11.97□□□□□ -0.49
CD40P25942 AC008026.2-201ENST00000495438 348 ntBASIC11.97□□□□□ -0.49
CD40P25942 OR2A1-AS1-210ENST00000496968 531 ntBASIC11.97□□□□□ -0.49
CD40P25942 AREG-202ENST00000502307 956 ntTSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 ALG1L6P-201ENST00000515248 758 ntBASIC11.97□□□□□ -0.49
CD40P25942 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC11.97□□□□□ -0.49
CD40P25942 COX5A-205ENST00000568517 582 ntTSL 3 BASIC11.97□□□□□ -0.49
CD40P25942 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 KRT18P8-201ENST00000581937 1246 ntBASIC11.97□□□□□ -0.49
CD40P25942 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC11.97□□□□□ -0.49
CD40P25942 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC11.97□□□□□ -0.49
CD40P25942 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 AC026748.1-201ENST00000624349 3251 ntBASIC11.96□□□□□ -0.49
CD40P25942 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CD40P25942 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CD40P25942 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC11.96□□□□□ -0.49
CD40P25942 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CD40P25942 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CD40P25942 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CD40P25942 STK16-203ENST00000409516 895 ntTSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC11.96□□□□□ -0.49
CD40P25942 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC11.96□□□□□ -0.49
CD40P25942 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC11.96□□□□□ -0.49
CD40P25942 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 MIR5196-201ENST00000578146 115 ntBASIC11.96□□□□□ -0.49
CD40P25942 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC11.96□□□□□ -0.49
CD40P25942 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC11.96□□□□□ -0.49
CD40P25942 LINC00431-202ENST00000636375 159 ntBASIC11.96□□□□□ -0.49
CD40P25942 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CD40P25942 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD40P25942 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.96□□□□□ -0.5
CD40P25942 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
CD40P25942 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms