Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.09□□□□□ -0.31
CHMP24386 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.09□□□□□ -0.31
CHMP24386 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.09□□□□□ -0.31
CHMP24386 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CHMP24386 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.09□□□□□ -0.31
CHMP24386 AC006335.1-201ENST00000445200 547 ntBASIC13.09□□□□□ -0.31
CHMP24386 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.09□□□□□ -0.31
CHMP24386 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CHMP24386 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.09□□□□□ -0.31
CHMP24386 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.09□□□□□ -0.31
CHMP24386 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.09□□□□□ -0.31
CHMP24386 AC106872.11-201ENST00000605838 421 ntBASIC13.09□□□□□ -0.31
CHMP24386 AL591471.1-201ENST00000621855 229 ntBASIC13.09□□□□□ -0.31
CHMP24386 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.09□□□□□ -0.31
CHMP24386 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.09□□□□□ -0.31
CHMP24386 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CHMP24386 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.09□□□□□ -0.31
CHMP24386 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.09□□□□□ -0.31
CHMP24386 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
CHMP24386 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CHMP24386 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CHMP24386 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CHMP24386 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CHMP24386 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CHMP24386 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CHMP24386 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CHMP24386 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CHMP24386 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CHMP24386 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 IGHJ2P-201ENST00000454480 60 ntBASIC13.08□□□□□ -0.32
CHMP24386 RN7SL11P-201ENST00000471305 293 ntBASIC13.08□□□□□ -0.32
CHMP24386 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.08□□□□□ -0.32
CHMP24386 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.08□□□□□ -0.32
CHMP24386 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 AC090857.1-201ENST00000527400 390 ntBASIC13.08□□□□□ -0.32
CHMP24386 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 AL161670.2-201ENST00000557650 1227 ntBASIC13.08□□□□□ -0.32
CHMP24386 MIR3188-201ENST00000583494 85 ntBASIC13.08□□□□□ -0.32
CHMP24386 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
CHMP24386 AC021016.3-201ENST00000608367 477 ntBASIC13.08□□□□□ -0.32
CHMP24386 AL157813.1-201ENST00000612996 587 ntBASIC13.08□□□□□ -0.32
CHMP24386 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.08□□□□□ -0.32
CHMP24386 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.08□□□□□ -0.32
CHMP24386 AC092299.1-201ENST00000632679 757 ntBASIC13.08□□□□□ -0.32
CHMP24386 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CHMP24386 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 KRT8P21-201ENST00000430398 1491 ntBASIC13.08□□□□□ -0.32
CHMP24386 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CHMP24386 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms