Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CD48P09326 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.41□□□□□ -0.1
CD48P09326 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.41□□□□□ -0.1
CD48P09326 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CD48P09326 MIR4525-201ENST00000580000 75 ntBASIC14.41□□□□□ -0.1
CD48P09326 AL031673.1-201ENST00000611460 466 ntBASIC14.41□□□□□ -0.1
CD48P09326 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.41□□□□□ -0.1
CD48P09326 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.41□□□□□ -0.1
CD48P09326 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.41□□□□□ -0.1
CD48P09326 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.41□□□□□ -0.1
CD48P09326 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 AC073862.5-201ENST00000624129 2027 ntBASIC14.41□□□□□ -0.1
CD48P09326 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 AC026271.4-201ENST00000578214 1833 ntBASIC14.41□□□□□ -0.1
CD48P09326 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 KRT18P9-201ENST00000604826 1300 ntBASIC14.41□□□□□ -0.1
CD48P09326 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 AF013593.1-201ENST00000458074 1487 ntBASIC14.4□□□□□ -0.1
CD48P09326 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CD48P09326 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.4□□□□□ -0.1
CD48P09326 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.4□□□□□ -0.1
CD48P09326 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.4□□□□□ -0.1
CD48P09326 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 AC114947.1-202ENST00000514136 344 ntBASIC14.4□□□□□ -0.1
CD48P09326 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.4□□□□□ -0.1
CD48P09326 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 AL161670.2-201ENST00000557650 1227 ntBASIC14.4□□□□□ -0.1
CD48P09326 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 MIR4754-201ENST00000582477 89 ntBASIC14.4□□□□□ -0.1
CD48P09326 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CD48P09326 AC012531.1-201ENST00000562848 2680 ntBASIC14.4□□□□□ -0.1
CD48P09326 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 PES1P2-201ENST00000449745 1735 ntBASIC14.4□□□□□ -0.1
CD48P09326 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CD48P09326 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.4□□□□□ -0.1
CD48P09326 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 AC115284.2-201ENST00000624646 2054 ntBASIC14.4□□□□□ -0.1
CD48P09326 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CD48P09326 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.4□□□□□ -0.1
CD48P09326 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD48P09326 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.39□□□□□ -0.11
CD48P09326 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 AC118758.2-201ENST00000614242 2813 ntBASIC14.39□□□□□ -0.11
CD48P09326 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms