Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.87□□□□□ -0.35
THBS1P07996 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
THBS1P07996 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.87□□□□□ -0.35
THBS1P07996 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.87□□□□□ -0.35
THBS1P07996 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.87□□□□□ -0.35
THBS1P07996 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
THBS1P07996 AC007279.1-201ENST00000448547 837 ntBASIC12.87□□□□□ -0.35
THBS1P07996 IGHJ2P-201ENST00000454480 60 ntBASIC12.87□□□□□ -0.35
THBS1P07996 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.87□□□□□ -0.35
THBS1P07996 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 AC020914.3-201ENST00000594712 304 ntBASIC12.87□□□□□ -0.35
THBS1P07996 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
THBS1P07996 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 AC010970.1-201ENST00000445125 1848 ntBASIC12.87□□□□□ -0.35
THBS1P07996 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.87□□□□□ -0.35
THBS1P07996 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.87□□□□□ -0.35
THBS1P07996 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 AC005014.1-201ENST00000432006 2976 ntBASIC12.87□□□□□ -0.35
THBS1P07996 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
THBS1P07996 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.86□□□□□ -0.35
THBS1P07996 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 AC027612.1-201ENST00000445234 2395 ntBASIC12.86□□□□□ -0.35
THBS1P07996 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 AC092506.1-202ENST00000401022 528 ntBASIC12.86□□□□□ -0.35
THBS1P07996 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.86□□□□□ -0.35
THBS1P07996 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC12.86□□□□□ -0.35
THBS1P07996 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 HIST2H2BC-201ENST00000498492 580 ntBASIC12.86□□□□□ -0.35
THBS1P07996 ALG1L13P-202ENST00000519320 584 ntBASIC12.86□□□□□ -0.35
THBS1P07996 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.86□□□□□ -0.35
THBS1P07996 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.86□□□□□ -0.35
THBS1P07996 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.86□□□□□ -0.35
THBS1P07996 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms