Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM3P06753 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM3P06753 MARK2P16-201ENST00000605714 1723 ntBASIC15.66■□□□□ 0.1
TPM3P06753 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TPM3P06753 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.66■□□□□ 0.1
TPM3P06753 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TPM3P06753 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 FAM207CP-201ENST00000443486 507 ntBASIC15.66■□□□□ 0.1
TPM3P06753 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 UGT1A2P-201ENST00000454886 866 ntBASIC15.66■□□□□ 0.1
TPM3P06753 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM3P06753 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.66■□□□□ 0.1
TPM3P06753 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.66■□□□□ 0.1
TPM3P06753 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM3P06753 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TPM3P06753 AL591471.1-201ENST00000621855 229 ntBASIC15.66■□□□□ 0.1
TPM3P06753 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TPM3P06753 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 PER1-202ENST00000354903 3115 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TPM3P06753 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC15.66■□□□□ 0.1
TPM3P06753 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM3P06753 AL008718.2-201ENST00000609206 1313 ntBASIC15.66■□□□□ 0.1
TPM3P06753 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TPM3P06753 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 MIR326-201ENST00000362220 95 ntBASIC15.65■□□□□ 0.1
TPM3P06753 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 AL355994.2-201ENST00000447882 704 ntBASIC15.65■□□□□ 0.1
TPM3P06753 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM3P06753 AL590640.2-201ENST00000457038 527 ntBASIC15.65■□□□□ 0.1
TPM3P06753 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.65■□□□□ 0.1
TPM3P06753 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM3P06753 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM3P06753 AC010319.3-201ENST00000597028 470 ntBASIC15.65■□□□□ 0.1
TPM3P06753 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TPM3P06753 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TPM3P06753 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
TPM3P06753 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM3P06753 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM3P06753 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM3P06753 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TPM3P06753 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms