Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 AL008718.2-201ENST00000609206 1313 ntBASIC14.94□□□□□ -0.02
TUBB4AP04350 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TUBB4AP04350 AL162615.1-201ENST00000429893 1653 ntBASIC14.94□□□□□ -0.02
TUBB4AP04350 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 TPM3P8-201ENST00000330554 643 ntBASIC14.94□□□□□ -0.02
TUBB4AP04350 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBB4AP04350 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 AC055876.2-201ENST00000531834 546 ntBASIC14.94□□□□□ -0.02
TUBB4AP04350 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.94□□□□□ -0.02
TUBB4AP04350 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC14.94□□□□□ -0.02
TUBB4AP04350 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBB4AP04350 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
TUBB4AP04350 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBB4AP04350 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBB4AP04350 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TUBB4AP04350 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TUBB4AP04350 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TUBB4AP04350 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 PISD-203ENST00000397500 2194 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBB4AP04350 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TUBB4AP04350 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBB4AP04350 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBB4AP04350 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBB4AP04350 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBB4AP04350 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBB4AP04350 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBB4AP04350 AC093004.1-201ENST00000508850 424 ntBASIC14.93□□□□□ -0.02
TUBB4AP04350 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBB4AP04350 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.93□□□□□ -0.02
TUBB4AP04350 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBB4AP04350 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.93□□□□□ -0.02
TUBB4AP04350 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TUBB4AP04350 MIR4745-201ENST00000577608 62 ntBASIC14.93□□□□□ -0.02
TUBB4AP04350 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TUBB4AP04350 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBB4AP04350 TMEM261P1-201ENST00000604899 340 ntBASIC14.93□□□□□ -0.02
TUBB4AP04350 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBB4AP04350 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBB4AP04350 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms