Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 PRKXP1-201ENST00000561423 1122 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 MT3-203ENST00000565838 421 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 HPX-213ENST00000615166 826 ntTSL 5 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AL139424.3-202ENST00000641619 917 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 PEG13-201ENST00000631594 5667 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 GOLGA8UP-201ENST00000527159 1755 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 LINC00265-2P-201ENST00000413372 782 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AL627422.1-201ENST00000434104 580 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 SCARNA12-201ENST00000459155 270 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 POLD4-208ENST00000532830 904 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AC138701.2-201ENST00000553634 226 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 JPT2-214ENST00000569765 782 ntTSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AC132825.4-202ENST00000578792 434 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 MIR4265-201ENST00000582152 99 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AC051619.9-201ENST00000623237 597 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 AL161773.1-201ENST00000624845 863 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 AC068587.10-201ENST00000641210 219 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 PDXDC2P-206ENST00000534700 1315 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms