Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AC004241.5-201ENST00000623870 2448 ntBASIC14.19□□□□□ -0.14
CCDC78A2IDD5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 RN7SKP214-201ENST00000364208 315 ntBASIC14.19□□□□□ -0.14
CCDC78A2IDD5 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AC006033.1-201ENST00000440505 426 ntBASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AP001258.2-201ENST00000529891 490 ntBASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AC244093.1-201ENST00000610837 814 ntBASIC14.19□□□□□ -0.14
CCDC78A2IDD5 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CR383656.2-201ENST00000548656 2254 ntBASIC14.18□□□□□ -0.14
CCDC78A2IDD5 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AC008620.2-201ENST00000510294 1569 ntBASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 SALL4P6-201ENST00000429385 1691 ntBASIC14.18□□□□□ -0.14
CCDC78A2IDD5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AC011742.3-201ENST00000439053 820 ntBASIC14.18□□□□□ -0.14
CCDC78A2IDD5 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AC138649.2-201ENST00000615886 705 ntBASIC14.18□□□□□ -0.14
CCDC78A2IDD5 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AL805961.1-203ENST00000641078 1258 ntBASIC14.18□□□□□ -0.14
CCDC78A2IDD5 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AL133338.1-201ENST00000565695 1517 ntBASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC78A2IDD5 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 SHMT1P1-201ENST00000419974 1312 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms