Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AC103592.1-201ENST00000394513 664 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AC003958.1-201ENST00000435883 421 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AC106820.3-201ENST00000561653 397 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AC004790.1-201ENST00000612686 536 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 CU634019.7-201ENST00000624153 1185 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 FP236241.2-201ENST00000624906 1185 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AL391825.1-201ENST00000457671 1364 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 AC087499.6-201ENST00000411576 835 ntBASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 CD8B2-202ENST00000417670 633 ntBASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 DUX4L27-201ENST00000554796 1261 ntBASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KCNIP3Q9Y2W7 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms