Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 AC092299.1-201ENST00000632679 757 ntBASIC12.5□□□□□ -0.41
COPS3Q9UNS2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 CU639417.3-201ENST00000624240 1404 ntBASIC12.5□□□□□ -0.41
COPS3Q9UNS2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 AC010970.1-201ENST00000445125 1848 ntBASIC12.5□□□□□ -0.41
COPS3Q9UNS2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 AC073862.5-201ENST00000624129 2027 ntBASIC12.5□□□□□ -0.41
COPS3Q9UNS2 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.5□□□□□ -0.41
COPS3Q9UNS2 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 AC092117.1-201ENST00000621230 3250 ntBASIC12.5□□□□□ -0.41
COPS3Q9UNS2 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 AL139158.3-201ENST00000641212 1562 ntBASIC12.49□□□□□ -0.41
COPS3Q9UNS2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.49□□□□□ -0.41
COPS3Q9UNS2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 COX5BP8-201ENST00000416911 349 ntBASIC12.49□□□□□ -0.41
COPS3Q9UNS2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 AC079178.1-201ENST00000420915 656 ntBASIC12.49□□□□□ -0.41
COPS3Q9UNS2 AL354877.1-201ENST00000424412 413 ntBASIC12.49□□□□□ -0.41
COPS3Q9UNS2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 FAM58BP-201ENST00000439056 645 ntBASIC12.49□□□□□ -0.41
COPS3Q9UNS2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 LINC02084-201ENST00000606069 1096 ntBASIC12.49□□□□□ -0.41
COPS3Q9UNS2 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS3Q9UNS2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 ZNF493-208ENST00000599461 1769 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 MARK2P16-201ENST00000605714 1723 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AC022497.1-201ENST00000624916 3691 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms