Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AL731571.1-201ENST00000617058 5428 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 RN7SKP109-201ENST00000410592 316 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 GUSBP10-201ENST00000417412 665 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AL512306.1-201ENST00000432698 848 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC092638.2-201ENST00000441105 947 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 RNA5SP417-201ENST00000516459 108 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AC006372.4-201ENST00000624122 1543 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 AL591122.2-201ENST00000624125 1853 ntBASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA1Q9UND3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 LINC02486-201ENST00000604157 3000 ntBASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA1Q9UND3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms