Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 CES1P1-201ENST00000421606 1704 ntBASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 TBC1D3J-201ENST00000620719 1426 ntBASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 OR8T1P-201ENST00000421347 918 ntBASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC007274.2-201ENST00000421675 662 ntBASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC116345.2-201ENST00000512837 523 ntBASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC012044.1-201ENST00000603431 297 ntBASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AC006453.1-201ENST00000636037 1257 ntBASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PARPBPQ9NWS1 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC004554.1-201ENST00000422830 1468 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 RCC2P1-201ENST00000452257 1476 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AL583805.1-201ENST00000391389 531 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AP000358.1-201ENST00000456260 156 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 RN7SL769P-201ENST00000469386 295 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC005740.1-201ENST00000515639 522 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 NDUFB10P1-201ENST00000567319 521 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms