Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AC005962.1-201ENST00000584100 773 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AC009884.2-201ENST00000603110 324 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AC244093.1-201ENST00000610837 814 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 FMO6P-201ENST00000236166 1620 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AC020917.4-201ENST00000623994 1999 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.08□□□□□ -0.31
AMBRA1Q9C0C7 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 AC008620.2-201ENST00000510294 1569 ntBASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 KRT18P36-201ENST00000411618 1276 ntBASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 RPL13AP20-201ENST00000459725 609 ntBASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 AL160314.3-201ENST00000556041 767 ntBASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AMBRA1Q9C0C7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 OR2R1P-201ENST00000441404 914 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 GOLGA2P4-201ENST00000441462 777 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AC012441.2-201ENST00000444843 739 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AC099548.2-209ENST00000480264 625 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms