Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC17.21■□□□□ 0.35
SHANK3Q9BYB0 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHANK3Q9BYB0 RN7SL4P-201ENST00000584058 295 ntBASIC17.21■□□□□ 0.35
SHANK3Q9BYB0 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC17.21■□□□□ 0.35
SHANK3Q9BYB0 BIN3-212ENST00000640731 450 ntTSL 5 BASIC17.21■□□□□ 0.35
SHANK3Q9BYB0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHANK3Q9BYB0 AC023830.3-201ENST00000612995 1455 ntBASIC17.21■□□□□ 0.34
SHANK3Q9BYB0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.21■□□□□ 0.34
SHANK3Q9BYB0 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 SPTLC1P3-201ENST00000403408 259 ntBASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 RN7SL477P-201ENST00000488440 286 ntBASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 PDPN-208ENST00000509009 571 ntTSL 4 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 AC006273.1-201ENST00000606966 861 ntBASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 INTS4P1-203ENST00000641008 3683 ntBASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 NCLP1-201ENST00000445357 1963 ntBASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 AL358781.1-202ENST00000321081 1360 ntBASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHANK3Q9BYB0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 AC046158.3-201ENST00000624947 2558 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 AC112694.1-202ENST00000540985 943 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 Z93930.2-203ENST00000585003 516 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 OR4C3-202ENST00000611380 597 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 MIR6165-201ENST00000614803 84 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 LINC00643-207ENST00000637212 734 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 AP000897.1-201ENST00000584036 1613 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 CDC20P1-201ENST00000488829 1500 ntBASIC17.19■□□□□ 0.34
SHANK3Q9BYB0 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AC010997.1-201ENST00000447646 350 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 JPT1-205ENST00000470924 663 ntTSL 5 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AC007622.1-201ENST00000488371 535 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 KRT127P-201ENST00000547183 433 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AC026304.1-201ENST00000597953 561 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 POM121L14P-201ENST00000406100 1558 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 ABCD1P2-201ENST00000429313 1601 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 FAM45BP-202ENST00000592932 1624 ntBASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC17.18■□□□□ 0.34
SHANK3Q9BYB0 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms