Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 BX324167.2-201ENST00000623717 3316 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 LINC00115-201ENST00000473798 1317 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 MSNP1-201ENST00000511640 1732 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC10.65□□□□□ -0.7
VGLL1Q99990 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
VGLL1Q99990 PTPA-220ENST00000436883 532 ntTSL 4 BASIC10.65□□□□□ -0.7
VGLL1Q99990 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 RN7SL692P-201ENST00000464677 288 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 NCK2-206ENST00000522586 490 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC10.65□□□□□ -0.7
VGLL1Q99990 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 AC140658.4-201ENST00000561990 352 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 APRT-204ENST00000563655 709 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AC009955.4-201ENST00000597192 544 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 TECR-220ENST00000600083 1204 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
VGLL1Q99990 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 Z98259.2-201ENST00000641583 609 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 AC024075.2-201ENST00000598112 1473 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 AC025183.3-201ENST00000623526 1482 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 DLX4-206ENST00000611342 1662 ntBASIC10.65□□□□□ -0.7
VGLL1Q99990 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
VGLL1Q99990 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VGLL1Q99990 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VGLL1Q99990 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
VGLL1Q99990 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VGLL1Q99990 AL031719.1-201ENST00000623365 2587 ntBASIC10.65□□□□□ -0.71
VGLL1Q99990 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VGLL1Q99990 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC102953.2-201ENST00000609755 3026 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC026271.4-201ENST00000578214 1833 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms