Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 AP002353.1-201ENST00000528257 1599 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AC004623.1-201ENST00000624592 2127 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 ABCD1P2-201ENST00000429313 1601 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AC107375.1-201ENST00000564464 2231 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 DLX4-206ENST00000611342 1662 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AL445250.1-201ENST00000641671 2259 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 LINC00567-201ENST00000569854 3409 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AC099336.1-201ENST00000417053 1171 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 SCARNA21-201ENST00000517026 139 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 MIR6775-201ENST00000617557 69 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 AL022323.5-201ENST00000624101 2059 ntBASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC50Q8IVM0 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 TNRC18P1-201ENST00000502875 3650 ntBASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AC134407.3-201ENST00000624035 2139 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms