Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.49□□□□□ -0.25
LYSMD4Q5XG99 AF013593.1-201ENST00000458074 1487 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC015802.1-201ENST00000588104 1449 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC089987.1-201ENST00000551654 2209 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AP002414.2-201ENST00000591780 3365 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 RHOQP2-201ENST00000449922 579 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC092910.2-201ENST00000491262 348 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 PMEL-214ENST00000550447 901 ntTSL 3 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC133555.4-201ENST00000569081 152 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC020910.6-201ENST00000623084 1459 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AC104640.1-201ENST00000562617 2109 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AP001267.2-201ENST00000532619 2086 ntBASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD4Q5XG99 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SNORD88B-201ENST00000408454 91 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 PSME2P2-201ENST00000453033 700 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 RN7SL838P-201ENST00000481676 295 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 MARK2P17-201ENST00000498560 841 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms