Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12□□□□□ -0.49
AP3S2P59780 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
AP3S2P59780 AC124283.3-201ENST00000570869 594 ntBASIC12□□□□□ -0.49
AP3S2P59780 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12□□□□□ -0.49
AP3S2P59780 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 AC120114.3-201ENST00000611923 658 ntBASIC12□□□□□ -0.49
AP3S2P59780 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12□□□□□ -0.49
AP3S2P59780 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 AC027601.3-201ENST00000622907 509 ntBASIC12□□□□□ -0.49
AP3S2P59780 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12□□□□□ -0.49
AP3S2P59780 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 AC011700.1-201ENST00000610409 2627 ntBASIC12□□□□□ -0.49
AP3S2P59780 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 MIR940-201ENST00000401276 94 ntBASIC11.99□□□□□ -0.49
AP3S2P59780 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.99□□□□□ -0.49
AP3S2P59780 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.99□□□□□ -0.49
AP3S2P59780 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.99□□□□□ -0.49
AP3S2P59780 TPRX2P-201ENST00000535362 881 ntBASIC11.99□□□□□ -0.49
AP3S2P59780 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.99□□□□□ -0.49
AP3S2P59780 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.99□□□□□ -0.49
AP3S2P59780 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.99□□□□□ -0.49
AP3S2P59780 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.99□□□□□ -0.49
AP3S2P59780 AC008825.2-201ENST00000603374 718 ntBASIC11.99□□□□□ -0.49
AP3S2P59780 ENPP7P14-201ENST00000621765 1040 ntBASIC11.99□□□□□ -0.49
AP3S2P59780 SHMT1P1-201ENST00000419974 1312 ntBASIC11.99□□□□□ -0.49
AP3S2P59780 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 CCT8L1P-201ENST00000465400 1674 ntBASIC11.99□□□□□ -0.49
AP3S2P59780 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.99□□□□□ -0.49
AP3S2P59780 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP3S2P59780 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms