Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.87□□□□□ -0.19
CSNK1DP48730 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CSNK1DP48730 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1DP48730 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1DP48730 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1DP48730 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1DP48730 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.87□□□□□ -0.19
CSNK1DP48730 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CSNK1DP48730 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 AC010327.5-201ENST00000586923 3061 ntBASIC13.87□□□□□ -0.19
CSNK1DP48730 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1DP48730 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1DP48730 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1DP48730 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1DP48730 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1DP48730 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1DP48730 AC024075.2-201ENST00000598112 1473 ntBASIC13.87□□□□□ -0.19
CSNK1DP48730 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1DP48730 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 FUCA1P1-201ENST00000374476 1351 ntBASIC13.86□□□□□ -0.19
CSNK1DP48730 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.86□□□□□ -0.19
CSNK1DP48730 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1DP48730 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 AC004837.1-201ENST00000446267 564 ntBASIC13.86□□□□□ -0.19
CSNK1DP48730 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1DP48730 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1DP48730 CES1P2-201ENST00000566467 1242 ntBASIC13.86□□□□□ -0.19
CSNK1DP48730 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 RN7SL736P-201ENST00000613111 269 ntBASIC13.86□□□□□ -0.19
CSNK1DP48730 AC026120.2-201ENST00000617239 309 ntBASIC13.86□□□□□ -0.19
CSNK1DP48730 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1DP48730 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1DP48730 AC073869.1-201ENST00000415574 2762 ntBASIC13.86□□□□□ -0.19
CSNK1DP48730 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1DP48730 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1DP48730 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.85□□□□□ -0.19
CSNK1DP48730 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSNK1DP48730 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CSNK1DP48730 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1DP48730 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 LINC00638-201ENST00000555578 2518 ntBASIC13.85□□□□□ -0.19
CSNK1DP48730 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1DP48730 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CSNK1DP48730 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.85□□□□□ -0.19
CSNK1DP48730 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.85□□□□□ -0.19
CSNK1DP48730 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.85□□□□□ -0.19
CSNK1DP48730 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.85□□□□□ -0.19
CSNK1DP48730 MPRIPP1-201ENST00000452433 1089 ntBASIC13.85□□□□□ -0.19
CSNK1DP48730 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.85□□□□□ -0.19
CSNK1DP48730 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.85□□□□□ -0.19
CSNK1DP48730 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.85□□□□□ -0.19
CSNK1DP48730 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.85□□□□□ -0.19
CSNK1DP48730 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1DP48730 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CSNK1DP48730 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1DP48730 AC104581.4-201ENST00000623126 3052 ntBASIC13.85□□□□□ -0.19
CSNK1DP48730 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms