Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6P35125 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6P35125 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
USP6P35125 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP6P35125 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.27■□□□□ 0.51
USP6P35125 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP6P35125 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP6P35125 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
USP6P35125 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 MED15P3-201ENST00000413613 326 ntBASIC18.26■□□□□ 0.51
USP6P35125 RBMX2P5-201ENST00000424312 969 ntBASIC18.26■□□□□ 0.51
USP6P35125 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC18.26■□□□□ 0.51
USP6P35125 AC105443.1-201ENST00000433754 712 ntBASIC18.26■□□□□ 0.51
USP6P35125 AC006328.1-201ENST00000437571 379 ntBASIC18.26■□□□□ 0.51
USP6P35125 TPT1P6-201ENST00000458298 514 ntBASIC18.26■□□□□ 0.51
USP6P35125 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6P35125 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC18.26■□□□□ 0.51
USP6P35125 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC18.26■□□□□ 0.51
USP6P35125 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC18.26■□□□□ 0.51
USP6P35125 TLE2-205ENST00000586422 389 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6P35125 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC18.26■□□□□ 0.51
USP6P35125 AC244097.1-201ENST00000621631 1216 ntBASIC18.26■□□□□ 0.51
USP6P35125 AC233280.19-201ENST00000633223 136 ntBASIC18.26■□□□□ 0.51
USP6P35125 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC18.26■□□□□ 0.51
USP6P35125 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
USP6P35125 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
USP6P35125 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
USP6P35125 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
USP6P35125 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6P35125 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
USP6P35125 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 PMF1-201ENST00000368273 884 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USP6P35125 AL356653.1-201ENST00000402743 360 ntBASIC18.25■□□□□ 0.51
USP6P35125 AC091807.1-201ENST00000418838 1544 ntBASIC18.25■□□□□ 0.51
USP6P35125 AC092865.2-201ENST00000439409 971 ntBASIC18.25■□□□□ 0.51
USP6P35125 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 RHOQP2-201ENST00000449922 579 ntBASIC18.25■□□□□ 0.51
USP6P35125 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 PEBP1P3-201ENST00000455475 548 ntBASIC18.25■□□□□ 0.51
USP6P35125 AC007679.1-201ENST00000458609 502 ntBASIC18.25■□□□□ 0.51
USP6P35125 AC113398.1-201ENST00000464124 406 ntBASIC18.25■□□□□ 0.51
USP6P35125 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC18.25■□□□□ 0.51
USP6P35125 KRT18P42-201ENST00000505048 1255 ntBASIC18.25■□□□□ 0.51
USP6P35125 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC18.25■□□□□ 0.51
USP6P35125 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
USP6P35125 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC18.25■□□□□ 0.51
USP6P35125 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC18.25■□□□□ 0.51
USP6P35125 INO80E-209ENST00000567254 625 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC18.25■□□□□ 0.51
USP6P35125 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 MFSD12-215ENST00000615613 688 ntBASIC18.25■□□□□ 0.51
USP6P35125 AC015813.5-201ENST00000624641 1514 ntBASIC18.25■□□□□ 0.51
USP6P35125 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC18.25■□□□□ 0.51
USP6P35125 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 AL365181.3-201ENST00000605886 3222 ntBASIC18.25■□□□□ 0.51
USP6P35125 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
USP6P35125 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
USP6P35125 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms