Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 STK25-235ENST00000543554 2556 ntTSL 2 BASIC18.95■□□□□ 0.62
CPS1P31327 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPS1P31327 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CPS1P31327 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 FKBP4P1-201ENST00000507284 1347 ntBASIC18.95■□□□□ 0.62
CPS1P31327 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPS1P31327 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC18.95■□□□□ 0.62
CPS1P31327 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC18.95■□□□□ 0.62
CPS1P31327 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC18.95■□□□□ 0.62
CPS1P31327 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC18.95■□□□□ 0.62
CPS1P31327 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC18.95■□□□□ 0.62
CPS1P31327 AP003170.2-201ENST00000544730 786 ntBASIC18.95■□□□□ 0.62
CPS1P31327 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC18.95■□□□□ 0.62
CPS1P31327 AC010601.2-201ENST00000623060 774 ntBASIC18.95■□□□□ 0.62
CPS1P31327 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.94■□□□□ 0.62
CPS1P31327 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC18.94■□□□□ 0.62
CPS1P31327 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CPS1P31327 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 AC106881.1-201ENST00000605849 3329 ntBASIC18.94■□□□□ 0.62
CPS1P31327 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CPS1P31327 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC18.94■□□□□ 0.62
CPS1P31327 APRT-202ENST00000426324 664 ntTSL 2 BASIC18.94■□□□□ 0.62
CPS1P31327 HNRNPA1P30-202ENST00000440699 997 ntBASIC18.94■□□□□ 0.62
CPS1P31327 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC18.94■□□□□ 0.62
CPS1P31327 TPI1P2-201ENST00000491343 752 ntBASIC18.94■□□□□ 0.62
CPS1P31327 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC18.94■□□□□ 0.62
CPS1P31327 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC18.94■□□□□ 0.62
CPS1P31327 DNM1P50-201ENST00000565767 508 ntBASIC18.94■□□□□ 0.62
CPS1P31327 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC18.94■□□□□ 0.62
CPS1P31327 AC117500.5-201ENST00000623233 527 ntBASIC18.94■□□□□ 0.62
CPS1P31327 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPS1P31327 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC18.94■□□□□ 0.62
CPS1P31327 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CPS1P31327 GAPDHP29-201ENST00000429913 985 ntBASIC18.93■□□□□ 0.62
CPS1P31327 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC18.93■□□□□ 0.62
CPS1P31327 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 AL391822.1-201ENST00000452580 562 ntBASIC18.93■□□□□ 0.62
CPS1P31327 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC18.93■□□□□ 0.62
CPS1P31327 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 AC108082.1-201ENST00000510857 331 ntBASIC18.93■□□□□ 0.62
CPS1P31327 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
CPS1P31327 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC18.93■□□□□ 0.62
CPS1P31327 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC18.93■□□□□ 0.62
CPS1P31327 AC090950.1-202ENST00000605733 644 ntBASIC18.93■□□□□ 0.62
CPS1P31327 BIN3-212ENST00000640731 450 ntTSL 5 BASIC18.93■□□□□ 0.62
CPS1P31327 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.93■□□□□ 0.62
CPS1P31327 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPS1P31327 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC18.92■□□□□ 0.62
CPS1P31327 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CPS1P31327 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CPS1P31327 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms