Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.11□□□□□ -0.31
CHMP24386 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CHMP24386 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.11□□□□□ -0.31
CHMP24386 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.11□□□□□ -0.31
CHMP24386 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 KRT18P36-201ENST00000411618 1276 ntBASIC13.11□□□□□ -0.31
CHMP24386 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 Z97180.1-201ENST00000445173 988 ntBASIC13.11□□□□□ -0.31
CHMP24386 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.11□□□□□ -0.31
CHMP24386 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.11□□□□□ -0.31
CHMP24386 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.11□□□□□ -0.31
CHMP24386 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.11□□□□□ -0.31
CHMP24386 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.11□□□□□ -0.31
CHMP24386 AC124068.2-201ENST00000569473 1109 ntBASIC13.11□□□□□ -0.31
CHMP24386 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.11□□□□□ -0.31
CHMP24386 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.11□□□□□ -0.31
CHMP24386 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.11□□□□□ -0.31
CHMP24386 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.11□□□□□ -0.31
CHMP24386 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.11□□□□□ -0.31
CHMP24386 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.11□□□□□ -0.31
CHMP24386 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 AC131902.2-201ENST00000566892 2172 ntBASIC13.11□□□□□ -0.31
CHMP24386 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHMP24386 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
CHMP24386 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.11□□□□□ -0.31
CHMP24386 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CHMP24386 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CHMP24386 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.1□□□□□ -0.31
CHMP24386 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CHMP24386 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.1□□□□□ -0.31
CHMP24386 CYP46A4P-201ENST00000414953 267 ntBASIC13.1□□□□□ -0.31
CHMP24386 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.1□□□□□ -0.31
CHMP24386 AL133466.1-201ENST00000447582 150 ntBASIC13.1□□□□□ -0.31
CHMP24386 SPTLC1P5-201ENST00000450718 252 ntBASIC13.1□□□□□ -0.31
CHMP24386 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.1□□□□□ -0.31
CHMP24386 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
CHMP24386 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
CHMP24386 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 PGAM1P5-201ENST00000548011 764 ntBASIC13.1□□□□□ -0.31
CHMP24386 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.1□□□□□ -0.31
CHMP24386 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHMP24386 CU633904.3-201ENST00000624042 1029 ntBASIC13.1□□□□□ -0.31
CHMP24386 AC138627.1-207ENST00000641560 1006 ntBASIC13.1□□□□□ -0.31
CHMP24386 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CHMP24386 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CHMP24386 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 AC018629.1-201ENST00000623381 1736 ntBASIC13.1□□□□□ -0.31
CHMP24386 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHMP24386 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CHMP24386 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHMP24386 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHMP24386 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHMP24386 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHMP24386 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms