Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CTSBP07858 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 KRT18P62-201ENST00000446618 1287 ntBASIC13.1□□□□□ -0.31
CTSBP07858 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.1□□□□□ -0.31
CTSBP07858 MIR3940-201ENST00000579148 102 ntBASIC13.1□□□□□ -0.31
CTSBP07858 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.1□□□□□ -0.31
CTSBP07858 AC011471.3-201ENST00000623576 402 ntBASIC13.1□□□□□ -0.31
CTSBP07858 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.1□□□□□ -0.31
CTSBP07858 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CTSBP07858 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.1□□□□□ -0.31
CTSBP07858 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CTSBP07858 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 NCLP1-201ENST00000445357 1963 ntBASIC13.09□□□□□ -0.31
CTSBP07858 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CTSBP07858 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSBP07858 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSBP07858 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CTSBP07858 SNORA50C-201ENST00000408535 133 ntBASIC13.09□□□□□ -0.31
CTSBP07858 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSBP07858 MARK2P9-201ENST00000430958 1727 ntBASIC13.09□□□□□ -0.31
CTSBP07858 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSBP07858 GULOP-201ENST00000454030 748 ntBASIC13.09□□□□□ -0.31
CTSBP07858 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.09□□□□□ -0.31
CTSBP07858 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.09□□□□□ -0.31
CTSBP07858 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.09□□□□□ -0.31
CTSBP07858 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSBP07858 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 AL359219.1-201ENST00000556311 934 ntBASIC13.09□□□□□ -0.31
CTSBP07858 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.09□□□□□ -0.31
CTSBP07858 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.09□□□□□ -0.31
CTSBP07858 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.09□□□□□ -0.31
CTSBP07858 SNORA50.1-201ENST00000628590 135 ntBASIC13.09□□□□□ -0.31
CTSBP07858 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSBP07858 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms