Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.21□□□□□ -0.61
UPK2O00526 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 PCDHB18P-202ENST00000526308 3197 ntBASIC11.21□□□□□ -0.61
UPK2O00526 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 AC004554.1-201ENST00000422830 1468 ntBASIC11.21□□□□□ -0.61
UPK2O00526 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK2O00526 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK2O00526 BX679664.3-201ENST00000414070 555 ntBASIC11.21□□□□□ -0.61
UPK2O00526 AC005034.1-201ENST00000426657 489 ntBASIC11.21□□□□□ -0.61
UPK2O00526 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.21□□□□□ -0.61
UPK2O00526 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK2O00526 AC113935.1-201ENST00000471722 555 ntBASIC11.21□□□□□ -0.61
UPK2O00526 AC005740.2-201ENST00000511085 419 ntBASIC11.21□□□□□ -0.61
UPK2O00526 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.21□□□□□ -0.61
UPK2O00526 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK2O00526 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC11.21□□□□□ -0.61
UPK2O00526 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
UPK2O00526 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
UPK2O00526 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.21□□□□□ -0.61
UPK2O00526 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
UPK2O00526 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.21□□□□□ -0.62
UPK2O00526 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 AC115284.2-201ENST00000624646 2054 ntBASIC11.21□□□□□ -0.62
UPK2O00526 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.21□□□□□ -0.62
UPK2O00526 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
UPK2O00526 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
UPK2O00526 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK2O00526 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 Z98257.2-202ENST00000641138 1548 ntBASIC11.2□□□□□ -0.62
UPK2O00526 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
UPK2O00526 AF013593.1-201ENST00000458074 1487 ntBASIC11.2□□□□□ -0.62
UPK2O00526 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 AC020763.3-201ENST00000625095 2904 ntBASIC11.2□□□□□ -0.62
UPK2O00526 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 AC063926.2-201ENST00000623766 1308 ntBASIC11.2□□□□□ -0.62
UPK2O00526 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
UPK2O00526 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms