Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 MIR1226-201ENST00000408658 75 ntBASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AL033381.2-201ENST00000603854 732 ntBASIC15.32■□□□□ 0.04
LOC285556D6RIA3 NF1P11-201ENST00000621292 1282 ntBASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 AC072061.1-201ENST00000569710 2234 ntBASIC15.32■□□□□ 0.04
LOC285556D6RIA3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.32■□□□□ 0.04
LOC285556D6RIA3 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 CA5BP1-205ENST00000435806 1064 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 RN7SL794P-201ENST00000469816 280 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 RN7SL47P-201ENST00000488710 299 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 AC099343.1-201ENST00000513481 609 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 CDIPT-AS1-203ENST00000638164 713 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 LINC00638-201ENST00000555578 2518 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 RN7SL76P-201ENST00000482435 289 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 FAM213AP2-201ENST00000521579 683 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 RN7SL300P-201ENST00000582522 318 ntBASIC15.31■□□□□ 0.04
LOC285556D6RIA3 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LOC285556D6RIA3 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 RPL4P6-201ENST00000438116 1304 ntBASIC15.3■□□□□ 0.04
LOC285556D6RIA3 AHCYP7-201ENST00000560847 1308 ntBASIC15.3■□□□□ 0.04
LOC285556D6RIA3 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC285556D6RIA3 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms