Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 AL031595.1-201ENST00000623969 4709 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 AC018638.5-201ENST00000450885 754 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 AC095040.1-201ENST00000513286 675 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 KLF17P1-201ENST00000547105 1126 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 NPM1P43-201ENST00000558669 786 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 AC135983.4-201ENST00000564116 1262 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 RN7SL555P-201ENST00000584742 339 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 AC011491.1-203ENST00000637688 543 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COL4A3BPQ9Y5P4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL4A3BPQ9Y5P4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 PYY2-201ENST00000315776 282 ntBASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 LINC00265-2P-201ENST00000413372 782 ntBASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 RPSAP31-201ENST00000416648 895 ntBASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 GUSBP10-201ENST00000417412 665 ntBASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 AC079112.1-201ENST00000454972 939 ntBASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 MIR2392-201ENST00000584881 84 ntBASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 AL139424.3-202ENST00000641619 917 ntBASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.58■□□□□ 0.08
COL4A3BPQ9Y5P4 FMO6P-201ENST00000236166 1620 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms