Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 HOMER2P2-201ENST00000451621 847 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 PGAM1P5-201ENST00000548011 764 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AC003686.1-201ENST00000550956 1034 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AC140658.4-201ENST00000561990 352 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AC005962.1-201ENST00000584100 773 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 LINC02084-201ENST00000606069 1096 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 SHMT1P1-201ENST00000419974 1312 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AC144522.1-201ENST00000625111 1658 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 AC118758.2-201ENST00000614242 2813 ntBASIC12.02□□□□□ -0.48
NICN1Q9BSH3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NICN1Q9BSH3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.02□□□□□ -0.49
NICN1Q9BSH3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 AC092580.1-201ENST00000433998 658 ntBASIC12.02□□□□□ -0.49
NICN1Q9BSH3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 AC006122.1-201ENST00000493323 440 ntBASIC12.02□□□□□ -0.49
NICN1Q9BSH3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 AC132938.2-201ENST00000579188 680 ntBASIC12.02□□□□□ -0.49
NICN1Q9BSH3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NICN1Q9BSH3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms