Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC003958.1-201ENST00000435883 421 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 CICP12-201ENST00000455801 843 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC005586.2-201ENST00000563946 837 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 RN7SL713P-201ENST00000582127 302 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC009955.4-201ENST00000597192 544 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC073413.1-201ENST00000603927 732 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC006453.4-201ENST00000636949 1252 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC106818.1-201ENST00000623223 3242 ntBASIC12.17□□□□□ -0.46
CCDC107Q8WV48 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AC073862.5-201ENST00000624129 2027 ntBASIC12.16□□□□□ -0.46
CCDC107Q8WV48 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AL136301.1-201ENST00000615830 422 ntBASIC12.16□□□□□ -0.46
CCDC107Q8WV48 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 IGHV3-72-202ENST00000621503 303 ntBASIC12.16□□□□□ -0.46
CCDC107Q8WV48 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 AC009093.10-201ENST00000641956 1442 ntBASIC12.16□□□□□ -0.46
CCDC107Q8WV48 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms