Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 OR8S1-201ENST00000310194 1080 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 MIR326-201ENST00000362220 95 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AC007389.4-201ENST00000454674 793 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 GPR53P-205ENST00000457298 1084 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 ACTR6P1-201ENST00000514311 1104 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AL022328.1-201ENST00000610050 478 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AL591471.1-201ENST00000621855 229 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AP002761.4-201ENST00000565433 3361 ntBASIC15.47■□□□□ 0.07
TSR1Q2NL82 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TSR1Q2NL82 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TSR1Q2NL82 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AL008718.2-201ENST00000609206 1313 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC004623.1-201ENST00000624592 2127 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC073869.1-201ENST00000415574 2762 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 RN7SKP199-201ENST00000410325 305 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 TTTY23B-201ENST00000442790 549 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 RSL24D1P2-201ENST00000445584 366 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 BCRP2-202ENST00000447763 634 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC055748.1-201ENST00000489836 959 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 BCRP6-201ENST00000510112 632 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 BCRP7-201ENST00000511549 544 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 SLC25A47P1-201ENST00000531577 414 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC106886.1-201ENST00000568660 600 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC015936.2-201ENST00000593177 259 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 AL355816.2-201ENST00000610049 647 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 IGHV3-72-202ENST00000621503 303 ntBASIC15.46■□□□□ 0.07
TSR1Q2NL82 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.46■□□□□ 0.07
TSR1Q2NL82 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TSR1Q2NL82 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms