Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP7AQ04656 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 AL136298.3-201ENST00000556746 445 ntBASIC19.88■□□□□ 0.77
ATP7AQ04656 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP7AQ04656 FRG2EP-201ENST00000634243 835 ntBASIC19.88■□□□□ 0.77
ATP7AQ04656 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ATP7AQ04656 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP7AQ04656 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 INTS4P1-203ENST00000641008 3683 ntBASIC19.88■□□□□ 0.77
ATP7AQ04656 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATP7AQ04656 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATP7AQ04656 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP7AQ04656 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP7AQ04656 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ATP7AQ04656 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATP7AQ04656 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP7AQ04656 RHPN1-AS1-201ENST00000518049 1918 ntBASIC19.87■□□□□ 0.77
ATP7AQ04656 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATP7AQ04656 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP7AQ04656 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 TUBB8P9-201ENST00000422534 1276 ntBASIC19.87■□□□□ 0.77
ATP7AQ04656 TUBB8P10-201ENST00000430210 1279 ntBASIC19.87■□□□□ 0.77
ATP7AQ04656 JPT1-205ENST00000470924 663 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP7AQ04656 AADAC-202ENST00000488869 719 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP7AQ04656 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 MIR4763-201ENST00000581461 92 ntBASIC19.87■□□□□ 0.77
ATP7AQ04656 AC006273.1-201ENST00000606966 861 ntBASIC19.87■□□□□ 0.77
ATP7AQ04656 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP7AQ04656 PXK-210ENST00000479241 2817 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP7AQ04656 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ATP7AQ04656 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP7AQ04656 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC19.86■□□□□ 0.77
ATP7AQ04656 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP7AQ04656 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 AC092284.1-201ENST00000511386 1289 ntBASIC19.86■□□□□ 0.77
ATP7AQ04656 AACSP1-202ENST00000521412 1095 ntBASIC19.86■□□□□ 0.77
ATP7AQ04656 CYP4F10P-201ENST00000589560 752 ntBASIC19.86■□□□□ 0.77
ATP7AQ04656 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP7AQ04656 AP006248.1-201ENST00000610471 67 ntBASIC19.86■□□□□ 0.77
ATP7AQ04656 AL117379.1-201ENST00000619319 677 ntBASIC19.86■□□□□ 0.77
ATP7AQ04656 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP7AQ04656 RPS9-213ENST00000626547 476 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 AC007336.3-201ENST00000623886 2160 ntBASIC19.86■□□□□ 0.77
ATP7AQ04656 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ATP7AQ04656 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP7AQ04656 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP7AQ04656 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP7AQ04656 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP7AQ04656 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP7AQ04656 PDPN-208ENST00000509009 571 ntTSL 4 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms