Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.68■□□□□ 0.1
CCNA1P78396 AC147876.1-201ENST00000504408 322 ntBASIC15.68■□□□□ 0.1
CCNA1P78396 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNA1P78396 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.68■□□□□ 0.1
CCNA1P78396 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.68■□□□□ 0.1
CCNA1P78396 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.68■□□□□ 0.1
CCNA1P78396 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCNA1P78396 PRMT1P1-201ENST00000604252 1009 ntBASIC15.68■□□□□ 0.1
CCNA1P78396 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.68■□□□□ 0.1
CCNA1P78396 BX322534.1-201ENST00000635574 241 ntBASIC15.68■□□□□ 0.1
CCNA1P78396 AC215524.1-201ENST00000635696 241 ntBASIC15.68■□□□□ 0.1
CCNA1P78396 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.67■□□□□ 0.1
CCNA1P78396 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCNA1P78396 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCNA1P78396 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 WASH7P-201ENST00000488147 1351 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.67■□□□□ 0.1
CCNA1P78396 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCNA1P78396 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.67■□□□□ 0.1
CCNA1P78396 AL157823.1-201ENST00000403727 628 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 PHBP10-201ENST00000416467 784 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.67■□□□□ 0.1
CCNA1P78396 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC15.67■□□□□ 0.1
CCNA1P78396 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 AC023051.2-201ENST00000541141 460 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 RN7SL134P-201ENST00000579756 303 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 AC006116.2-201ENST00000589958 988 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCNA1P78396 AC010531.8-201ENST00000623341 685 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 LINC02486-201ENST00000604157 3000 ntBASIC15.67■□□□□ 0.1
CCNA1P78396 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CCNA1P78396 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCNA1P78396 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNA1P78396 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.67■□□□□ 0.1
CCNA1P78396 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNA1P78396 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCNA1P78396 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCNA1P78396 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNA1P78396 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 SDCBP2P1-201ENST00000416115 614 ntBASIC15.66■□□□□ 0.1
CCNA1P78396 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNA1P78396 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.66■□□□□ 0.1
CCNA1P78396 CCND3P1-201ENST00000438347 580 ntBASIC15.66■□□□□ 0.1
CCNA1P78396 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms