Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H6P61129 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 TUBB2BP1-201ENST00000404155 871 ntBASIC18.28■□□□□ 0.52
ZC3H6P61129 AL954722.1-201ENST00000431238 259 ntBASIC18.28■□□□□ 0.52
ZC3H6P61129 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H6P61129 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC18.28■□□□□ 0.52
ZC3H6P61129 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H6P61129 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC18.28■□□□□ 0.52
ZC3H6P61129 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H6P61129 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC18.28■□□□□ 0.52
ZC3H6P61129 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC18.28■□□□□ 0.52
ZC3H6P61129 AL512324.3-201ENST00000619383 882 ntBASIC18.28■□□□□ 0.52
ZC3H6P61129 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H6P61129 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.28■□□□□ 0.52
ZC3H6P61129 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H6P61129 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H6P61129 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ZC3H6P61129 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H6P61129 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ZC3H6P61129 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ZC3H6P61129 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.27■□□□□ 0.52
ZC3H6P61129 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC18.27■□□□□ 0.52
ZC3H6P61129 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
ZC3H6P61129 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ZC3H6P61129 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ZC3H6P61129 AC133555.4-201ENST00000569081 152 ntBASIC18.27■□□□□ 0.52
ZC3H6P61129 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC18.27■□□□□ 0.52
ZC3H6P61129 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC18.27■□□□□ 0.52
ZC3H6P61129 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC18.27■□□□□ 0.52
ZC3H6P61129 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ZC3H6P61129 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ZC3H6P61129 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.27■□□□□ 0.52
ZC3H6P61129 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H6P61129 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H6P61129 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H6P61129 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H6P61129 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.27■□□□□ 0.51
ZC3H6P61129 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ZC3H6P61129 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ZC3H6P61129 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H6P61129 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H6P61129 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
ZC3H6P61129 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
ZC3H6P61129 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H6P61129 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H6P61129 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 AC026271.1-201ENST00000447794 1348 ntBASIC18.26■□□□□ 0.51
ZC3H6P61129 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC18.26■□□□□ 0.51
ZC3H6P61129 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H6P61129 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC18.26■□□□□ 0.51
ZC3H6P61129 HMGA1P2-201ENST00000430198 324 ntBASIC18.26■□□□□ 0.51
ZC3H6P61129 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
ZC3H6P61129 AL356000.1-201ENST00000441073 1238 ntBASIC18.26■□□□□ 0.51
ZC3H6P61129 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC18.26■□□□□ 0.51
ZC3H6P61129 RNA5SP288-201ENST00000516075 93 ntBASIC18.26■□□□□ 0.51
ZC3H6P61129 MYL6-215ENST00000549566 685 ntTSL 2 BASIC18.26■□□□□ 0.51
ZC3H6P61129 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ZC3H6P61129 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC18.26■□□□□ 0.51
ZC3H6P61129 AC008622.3-201ENST00000621170 600 ntBASIC18.26■□□□□ 0.51
ZC3H6P61129 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H6P61129 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms