Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 MTHFR-210ENST00000641407 2387 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.57□□□□□ -0.08
MTHFRP42898 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MTHFRP42898 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MTHFRP42898 AC097359.2-201ENST00000604992 2389 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MTHFRP42898 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.56□□□□□ -0.08
MTHFRP42898 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.56□□□□□ -0.08
MTHFRP42898 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 MIR1307-201ENST00000408840 149 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 HMGA1P1-201ENST00000415560 1062 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 PGAM1P11-201ENST00000416729 680 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.56□□□□□ -0.08
MTHFRP42898 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.56□□□□□ -0.08
MTHFRP42898 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.56□□□□□ -0.08
MTHFRP42898 AC027612.2-202ENST00000445955 1199 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 ALG1L7P-201ENST00000502317 768 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.56□□□□□ -0.08
MTHFRP42898 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.56□□□□□ -0.08
MTHFRP42898 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
MTHFRP42898 GGNBP1-204ENST00000613113 887 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.56□□□□□ -0.08
MTHFRP42898 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.56□□□□□ -0.08
MTHFRP42898 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.56□□□□□ -0.08
MTHFRP42898 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MTHFRP42898 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MTHFRP42898 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.55□□□□□ -0.08
MTHFRP42898 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.55□□□□□ -0.08
MTHFRP42898 HSPA7-201ENST00000445535 1927 ntBASIC14.55□□□□□ -0.08
MTHFRP42898 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
MTHFRP42898 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
MTHFRP42898 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms